Class Hierarchy
- java.lang.Object
- org.snpeff.SnpEff (implements org.snpeff.snpEffect.commandLine.CommandLine)
- org.snpeff.snpEffect.commandLine.SnpEffCmdAcat
- org.snpeff.snpEffect.commandLine.SnpEffCmdBuild
- org.snpeff.snpEffect.commandLine.SnpEffCmdBuildNextProt
- org.snpeff.snpEffect.commandLine.SnpEffCmdCds
- org.snpeff.snpEffect.commandLine.SnpEffCmdClosest
- org.snpeff.snpEffect.commandLine.SnpEffCmdCount
- org.snpeff.snpEffect.commandLine.SnpEffCmdDatabases
- org.snpeff.snpEffect.commandLine.SnpEffCmdDownload
- org.snpeff.snpEffect.commandLine.SnpEffCmdDump
- org.snpeff.snpEffect.commandLine.SnpEffCmdEff (implements org.snpeff.snpEffect.VcfAnnotator)
- org.snpeff.snpEffect.commandLine.SnpEffCmdGenes2Bed
- org.snpeff.snpEffect.commandLine.SnpEffCmdGsa
- org.snpeff.snpEffect.commandLine.SnpEffCmdLen
- org.snpeff.snpEffect.commandLine.SnpEffCmdPdb
- org.snpeff.snpEffect.commandLine.SnpEffCmdProtein
- org.snpeff.snpEffect.commandLine.SnpEffCmdSeq
- org.snpeff.snpEffect.commandLine.SnpEffCmdShow
- org.snpeff.snpEffect.commandLine.SnpEffCmdTranslocationsReport
- org.snpeff.SnpEff (implements org.snpeff.snpEffect.commandLine.CommandLine)
Interface Hierarchy
- org.snpeff.snpEffect.commandLine.CommandLine
Enum Class Hierarchy
- java.lang.Object
- java.lang.Enum<E> (implements java.lang.Comparable<T>, java.lang.constant.Constable, java.io.Serializable)
- org.snpeff.snpEffect.commandLine.SnpEffCmdDump.DumpFormat
- java.lang.Enum<E> (implements java.lang.Comparable<T>, java.lang.constant.Constable, java.io.Serializable)