Package org.snpeff.geneSets.algorithm
Enum Class EnrichmentAlgorithm.EnrichmentAlgorithmType
java.lang.Object
java.lang.Enum<EnrichmentAlgorithm.EnrichmentAlgorithmType>
org.snpeff.geneSets.algorithm.EnrichmentAlgorithm.EnrichmentAlgorithmType
- All Implemented Interfaces:
Serializable
,Comparable<EnrichmentAlgorithm.EnrichmentAlgorithmType>
,Constable
- Enclosing class:
- EnrichmentAlgorithm
public static enum EnrichmentAlgorithm.EnrichmentAlgorithmType
extends Enum<EnrichmentAlgorithm.EnrichmentAlgorithmType>
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Nested Class Summary
Nested classes/interfaces inherited from class java.lang.Enum
Enum.EnumDesc<E extends Enum<E>>
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Enum Constant Summary
Enum Constants -
Method Summary
Modifier and TypeMethodDescriptionboolean
isBinary()
Is the algorithm base on "interesting / not-interesting" binary clasification?boolean
isGreedy()
Is this a greedy algorithm?boolean
isRank()
Does the algorithm need a rank statistic?Returns the enum constant of this class with the specified name.values()
Returns an array containing the constants of this enum class, in the order they are declared.
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Enum Constant Details
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FISHER_GREEDY
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RANKSUM_GREEDY
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FISHER
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RANKSUM
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LEADING_EDGE_FRACTION
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NONE
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Method Details
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values
Returns an array containing the constants of this enum class, in the order they are declared.- Returns:
- an array containing the constants of this enum class, in the order they are declared
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valueOf
Returns the enum constant of this class with the specified name. The string must match exactly an identifier used to declare an enum constant in this class. (Extraneous whitespace characters are not permitted.)- Parameters:
name
- the name of the enum constant to be returned.- Returns:
- the enum constant with the specified name
- Throws:
IllegalArgumentException
- if this enum class has no constant with the specified nameNullPointerException
- if the argument is null
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isBinary
public boolean isBinary()Is the algorithm base on "interesting / not-interesting" binary clasification?- Returns:
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isGreedy
public boolean isGreedy()Is this a greedy algorithm?- Returns:
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isRank
public boolean isRank()Does the algorithm need a rank statistic?- Returns:
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