Class TestCasesIntegrationSnpEnsembl
java.lang.Object
org.snpeff.snpEffect.testCases.integration.TestCasesIntegrationBase
org.snpeff.snpEffect.testCases.integration.TestCasesIntegrationSnpEnsembl
Test random SNP changes
- Author:
- pcingola
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Field Summary
Fields inherited from class org.snpeff.snpEffect.testCases.integration.TestCasesIntegrationBase
BASE_DIR, debug, ignoreErrors, prefixes, shiftHgvs, SHOW_EVERY, testsDir, testType, verbose
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Constructor Summary
Constructors -
Method Summary
Methods inherited from class org.snpeff.snpEffect.testCases.integration.TestCasesIntegrationBase
applyTranscript, before, build, buildAndCompare, buildEmbl, buildGeneBank, buildGeneBank, buildGetBuildCmd, buildGff3AndCompare, buildGtfAndCompare, checkHgvs, checkNoChange, checkTranscriptError, compareHgvs, compareHgvs, compareVep, compareVepSO, init, loadSnpEffectPredictor, path, pathClassName, pathMigrate, showTranscripts, showTranscripts, snpEffect, snpEffect, snpEffectCancer
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Constructor Details
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TestCasesIntegrationSnpEnsembl
public TestCasesIntegrationSnpEnsembl()
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Method Details
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test_01_ENST00000369219
@Test public void test_01_ENST00000369219() -
test_01_ENST00000369368
@Test public void test_01_ENST00000369368() -
test_01_ENST00000415551
@Test public void test_01_ENST00000415551() -
test_01_ENST00000434489
@Test public void test_01_ENST00000434489() -
test_02
@Test public void test_02() -
test_03
@Test public void test_03()
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