Class CodonChangeIns

java.lang.Object
org.snpeff.interval.codonChange.CodonChange
org.snpeff.interval.codonChange.CodonChangeIns

public class CodonChangeIns extends CodonChange
Calculate codon changes produced by an insertion
Author:
pcingola
  • Constructor Details

  • Method Details

    • codonChange

      protected boolean codonChange(Exon exon)
      Analyze insertions in this transcript. Add changeEffect to 'changeEffect'
      Overrides:
      codonChange in class CodonChange
    • codonsAlt

      protected String codonsAlt()
      Get new (modified) codons
      Overrides:
      codonsAlt in class CodonChange