Package org.snpeff.interval
Class ExonSpliceCharacterizer
java.lang.Object
org.snpeff.interval.ExonSpliceCharacterizer
Characterize exons based on alternative splicing
References: "Alternative splicing and evolution - diversification, exon definition and function" (see Box 1)
- Author:
- pablocingolani
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Field Summary
Fields -
Constructor Summary
ConstructorsConstructorDescriptionExonSpliceCharacterizer
(String genomeVer) ExonSpliceCharacterizer
(Genome genome) -
Method Summary
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Field Details
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MAX_EXONS
public static final int MAX_EXONS- See Also:
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SHOW_EVERY
public static final int SHOW_EVERY- See Also:
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Constructor Details
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ExonSpliceCharacterizer
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ExonSpliceCharacterizer
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Method Details
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characterize
Characterize all exons -
setVerbose
public void setVerbose(boolean verbose)
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