Class TestCasesApplyIns


public class TestCasesApplyIns extends TestCasesBaseApply
Test cases: apply a variant (INS) to a transcript
  • Constructor Details

    • TestCasesApplyIns

      public TestCasesApplyIns()
  • Method Details

    • test_apply_variant_01

      @Test public void test_apply_variant_01()
      Variant before exon
    • test_apply_variant_02

      @Test public void test_apply_variant_02()
      Variant before exon
    • test_apply_variant_03

      @Test public void test_apply_variant_03()
      Variant overlapping exon start
    • test_apply_variant_04

      @Test public void test_apply_variant_04()
      Variant at exon start
    • test_apply_variant_05

      @Test public void test_apply_variant_05()
      Variant in exon
    • test_apply_variant_06

      @Test public void test_apply_variant_06()
      Variant in exon
    • test_apply_variant_07

      @Test public void test_apply_variant_07()
      Variant overlapping exon end
    • test_apply_variant_08

      @Test public void test_apply_variant_08()
      Variant right after exon end
    • test_apply_variant_09

      @Test public void test_apply_variant_09()
      Variant after exon end
    • test_apply_variant_10

      @Test public void test_apply_variant_10()
      Variant over exon: variant is larger than exon, starts before exon and overlaps the whole exon
    • test_apply_variant_11

      @Test public void test_apply_variant_11()
      Variant over exon: variant is larger than exon and starts right at exons start and ends after exon end
    • test_apply_variant_12

      @Test public void test_apply_variant_12()
      Variant over exon: variant is larger than exon, starts before exon start and end right at exon end
    • test_apply_variant_13

      @Test public void test_apply_variant_13()
      Variant over exon: variant is on the same coordiantes as exon