Package org.snpeff.reactome
Class Compartment
java.lang.Object
org.snpeff.reactome.Entity
org.snpeff.reactome.Compartment
- All Implemented Interfaces:
Comparable<Entity>
A Reactome compartment (a part of a cell)
- Author:
- pcingola
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Nested Class Summary
Nested classes/interfaces inherited from class org.snpeff.reactome.Entity
Entity.TransferFunction
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Field Summary
Fields inherited from class org.snpeff.reactome.Entity
BETA, compartment, debug, fixedOutput, geneIds, id, name, output, TRANSFER_FUNCTION, weight
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Constructor Summary
Constructors -
Method Summary
Methods inherited from class org.snpeff.reactome.Entity
addGeneId, calc, calc, compareTo, getCompartment, getGeneIds, getId, getName, getOutput, getWeight, hasOutput, isFixed, isReaction, reset, setCompartment, setFixedOutput, setWeight, toString, toString, toStringSimple, transferFunction
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Constructor Details
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Compartment
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