Virtual arc consistency (VAC) Virtual arc consistency for weighted csp,
M. Cooper, S. de Givry, M. Sanchez, T. Schiex, and M. Zytnicki
In Proc. of AAAI-08, Chicago, IL, 2008.
Russian doll search exploiting a tree decomposition (RDS-BTD) Russian doll search with tree decomposition,
M Sanchez, D Allouche, S de Givry, and T Schiex,
In Proc. of IJCAI'09, Pasadena (CA), USA, 2009.
Soft bounds arc consistency (BAC) Bounds Arc Consistency for Weighted CSPs,
M. Zytnicki, C. Gaspin, S. de Givry, and T. Schiex,
Journal of Artificial Intelligence Research, 35:593-621, 2009.
Decomposable global cost functions (wregular, wamong, wsum) Decomposing global cost functions,
D Allouche, C Bessiere, P Boizumault, S de Givry, P Gutierrez, S Loudni, JP Métivier, and T Schiex,
In Proc. of AAAI-12, Toronto, Canada, 2012.
Pruning by dominance (DEE) Dead-End Elimination for Weighted CSP,
S de Givry, S Prestwich, and B O'Sullivan,
In Proc. of CP-13, pages 263-272, Uppsala, Sweden, 2013.
toulbar2 for Combinatorial Optimization in Life Sciences
Computational Protein Design
Cost function network-based design of protein-protein interactions: predicting changes in binding affinity,
Clément Viricel, Simon de Givry, Thomas Schiex, and Sophie Barbe,
Bioinformatics, 2018.
Algorithms for protein design,
Pablo Gainza, Hunter M Nisonoff, Bruce R Donald,
Current Opinion in Structural Biology, 39:6-26, 2016.
Fast search algorithms for computational protein design,
Seydou Traoré, Kyle E Roberts, David Allouche, Bruce R Donald, Isabelle André, Thomas Schiex, and Sophie Barbe,
Journal of computational chemistry, 2016.
Comparing three stochastic search algorithms for computational protein design: Monte Carlo, replica exchange Monte Carlo, and a multistart, steepest-descent heuristic,
David Mignon, Thomas Simonson,
Journal of computational chemistry, 2016.
Protein sidechain conformation predictions with an mmgbsa energy function,
Thomas Gaillard, Nicolas Panel, and Thomas Simonson,
Proteins: Structure, Function, and Bioinformatics, 2016.
Improved energy bound accuracy enhances the efficiency of continuous protein design,
Kyle E Roberts and Bruce R Donald,
Proteins: Structure, Function, and Bioinformatics, 83(6):1151-1164, 2015.
Guaranteed discrete energy optimization on large protein design problems,
D. Simoncini, D. Allouche, S. de Givry, C. Delmas, S. Barbe, and T. Schiex,
Journal of Chemical Theory and Computation, 2015. Computational protein design as an optimization problem,
David Allouche, Isabelle André, Sophie Barbe, Jessica Davies, Simon de Givry, George Katsirelos, Barry O'Sullivan, Steve Prestwich, Thomas Schiex, and Seydou Traoré,
Journal of Artificial Intelligence, 212:59-79, 2014.
A new framework for computational protein design through cost function network optimization,
Seydou Traoré, David Allouche, Isabelle André, Simon de Givry, George Katsirelos, Thomas Schiex, and Sophie Barbe,
Bioinformatics, 29(17):2129-2136, 2013.
Constraint Satisfaction, Distributed Constraint Optimization
Local Consistency and SAT-Solvers, P. Jeavons and J. Petke, Journal of Artificial Intelligence Research, 43:329-351, 2012.
SAT-based MaxSAT algorithms,
Carlos Ansótegui and Maria Luisa Bonet and Jordi Levy,
Artificial Intelligence, 196:77-105, 2013.
Probabilistic Inference Based Message-Passing for Resource Constrained DCOPs,
Supriyo Ghosh, Akshat Kumar, Pradeep Varakantham,
In Proc. of IJCAI, 2015.
Data Mining and Machine Learning
A constraint programming approach for mining sequential patterns in a sequence database,
Jean-Philippe Métivier, Samir Loudni, and Thierry Charnois,
In Proc. of the ECML/PKDD Workshop on Languages for Data Mining and Machine Learning, Praha, Czech republic, 2013.
Timetabling, planning and POMDP
Solving a Judge Assignment Problem Using Conjunctions of Global Cost Functions,
S de Givry, J.H.M. Lee, K.L. Leung, and Y.W. Shum,
In Proc. of CP-14, pages 797-812, Lyon, France, 2014.
Optimally solving Dec-POMDPs as continuous-state MDPs,
Jilles Steeve Dibangoye, Christopher Amato, Olivier Buffet, and François Charpillet,
In Proc. of IJCAI, pages 90-96, 2013.
A weighted csp approach to cost-optimal planning,
Martin C Cooper, Marie de Roquemaurel, and Pierre Régnier,
Ai Communications, 24(1):1-29, 2011.
Point-based backup for decentralized POMDPs: Complexity and new algorithms,
Akshat Kumar and Shlomo Zilberstein,
In Proceedings of the 9th International Conference on Autonomous Agents and Multiagent Systems, 1:1315-1322, 2010.
Inference, Sampling, and Diagnostic
C. Viricel, D. Simoncini, D. Allouche, S. de Givry, S. Barbe, and T. Schiex,
Approximate counting with deterministic guarantees for affinity computations,
In Proc. of Modeling, Computation and Optimization in Information Systems and Management Sciences - MCO'15, Metz, France, 2015.
Discrete sampling with universal hashing,
Stefano Ermon, Carla P Gomes, Ashish Sabharwal, and Bart Selman,
In Proc. of NIPS, pages 2085-2093, 2013.
Compiling ai engineering models for probabilistic inference,
Paul Maier, Dominik Jain, and Martin Sachenbacher,
In KI 2011: Advances in Artifcial Intelligence, pages 191-203, 2011.
Diagnostic hypothesis enumeration vs. probabilistic inference for hierarchical automata models,
Paul Maier, Dominik Jain, and Martin Sachenbacher,
In Proc. of the International Workshop on Principles of Diagnosis, Murnau, Germany, 2011.
Computer Vision and Energy Minimization
Exact MAP-inference by Confining Combinatorial Search with LP Relaxation,
Stefan Haller, Paul Swoboda, Bogdan Savchynskyy,
In Proc. of AAAI, 2018.
Computer Music
Exploiting structural relationships in audio music signals using markov logic networks,
Hélène Papadopoulos and George Tzanetakis,
In Proc. of 38th International Conference on Acoustics, Speech, and Signal Processing (ICASSP), pages 4493-4497, Canada, 2013.
Modeling chord and key structure with markov logic,
Hélène Papadopoulos and George Tzanetakis,
In Proc. of the Society for Music Information Retrieval (ISMIR), pages 121-126, 2012.
Inductive Logic Programming
Extension of the top-down data-driven strategy to ILP,
Erick Alphonse and Céline Rouveirol,
In Proc. of Inductive Logic Programming, pages 49-63, 2007.
Other domains
An automated model abstraction operator implemented in the multiple modeling environment MOM,
Peter Struss, Alessandro Fraracci, and D Nyga,
In Proc. of the 25th International Workshop on Qualitative Reasoning, Barcelona, Spain, 2011.
Modeling Flowchart Structure Recognition as a Max-Sum Problem,
Martin Bresler, Daniel Prusa, Václav Hlavác,
In Proc. of International Conference on Document Analysis and Recognition, Washington, DC, USA, 1215-1219, 2013.
Specific Events
toulbar2 projects meeting at CP 2016, Toulouse, France, September 5, 2016.